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 Common terminal commands

COMMON TERMINAL COMMANDS

TO OPEN GDA CLIENT

 $ gda client 

TO OPEN THE BEAMLINE SYNOPTIC 

$ tlauncher -f diad 

TO OPEN YOUR DATA FOLDER 

$ cd dls/k11/data/2023/<VISIT NUMBER>/ 
$ gio open . 

FIJI/IMAGE J

$ Module load imageJ/2019 
$ imagej 

SAVU 

$ module load savu

To configure a process list

$ savu_config -i <path to savu list> 

To submit a job (requires ssh to Wilson)

savu_mpi <raw data> <process list> <output dir> 

DAWN

$ module load dawn 
$ dawn32G 
 Dawn on DIAD

DAWN on DIAD

  • How to install dawn

  • DIAD example diffraction + imaging data

  • Cheat sheets

  • Videos?

  • Work out the main features that we use on DIAD:

    • Visualise the patterns

    • Visualise the 3d Volumes?

    • Slice/Re-slice direction

    • View sinograms

    • Apply filters

    • If anything takes more than 5 clicks - Jake to fix.

The following will load dawn in linux with access to 32GB of memory. 

module load dawn 
dawn32G 

image-20240628-125330.png

module load dawn
dawn32G

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